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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: WAKLI_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.96
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRRRLFFSV LLSILTLFIN GPLITTAQSP PSSSTSCNRI CGGIEIPFPF GIGRRDCFLN  60
   61 DWYEVVCNST TSGKSLAPFL YKINRELVSI TLRSSIDSSY GVVHIKSPVT SSGCSQRPVK 120
  121 PLPLNLTGKG SPFFITDSNR LVSVGCDNRA LITDIESQIT GCESSCDGDK SRLDKICGGY 180
  181 TCCQAKIPAD RPQVIGVDLE SSGGNTTQGG NCKVAFLTNE TYSPANVTEP EQFYTNGFTV 240
  241 IELGWYFDTS DSRLTNPVGC VNLTETGIYT SAPSCVCEYG NFSGFGYSNC YCNQIGYRGN 300
  301 PYLPGGCIDI DECEEGKGLS SCGELTCVNV PGSWRCELNG VGKIKPLFPG LVLGFPLLFL 360
  361 VLGIWGLIKF VKKRRKIIRK RMFFKRNGGL LLKQQLTTRG GNVQSSKIFS SKELEKATDN 420
  421 FNMNRVLGQG GQGTVYKGML VDGRIVAVKR SKVLDEDKVE EFINEVGVLS QINHRNIVKL 480
  481 MGCCLETEVP ILVYEHIPNG DLFKRLHHDS DDYTMTWDVR LRISVEIAGA LAYLHSAAST 540
  541 PVYHRDVKTT NILLDEKYRA KVSDFGTSRS INVDQTHLTT LVAGTFGYLD PEYFQTSQFT 600
  601 DKSDVYSFGV VLVELITGEK PFSVMRPEEN RGLVSHFNEA MKQNRVLDIV DSRIKEGCTL 660
  661 EQVLAVAKLA RRCLSLKGKK RPNMREVSVE LERIRSSPED LELHIEEEDE EECAMEINMD 720
  721 DSWSVDMTAP ASLFDLSPKL DVEPLVPQRT W

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle