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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|117166020, gi...
Protein type: Transmembrane
Type Confidence: 0.58
Topology Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSVLRFRKL CYVEAVKCSS GKRNGDEKKR DNVEKVGKKQ QRKEGRCIDS CCRVIGYLCT  60
   61 TWWLLLFLGN FLPGLKAPAD SPGARLKREG LTGFHPVVLV PGIVTGGLEL WEGRPCAQGL 120
  121 FRKRLWGGSF VEMFKRPLCW LEHLSLDNET GLDPPGIRVR AVPGLVAADY FAPGYFVWAV 180
  181 LIENLARIGY EQKNMYMAAY DWRLSFQNTE VRDQALSRLK SKIELMYATN GNKKVVVVPH 240
  241 SMGVLYFLHF LKWVESPPPM GGGGGPSWCA KHIKAIMNVG PAFLGVPKSF SSILSAEGKD 300
  301 ISFIRSMAPG LFDETFRRFQ TMEHVMRVSR TWDSVVSLIP KGGETLWGNL DWSPEEEYNC 360
  361 SSVTKKYKLT SILSNSNKTD LRSSQIKAAT NYGRIISFGK ASSELPSSQL SAFDATEDVH 420
  421 QSVPNNRCGG VWTEYNQMSK ESVQKVAENK AYTAKTAIDL LRFVAPNMMK RAESHFSHGI 480
  481 ADDLDDPKYK HYKYWSNPLE TKLPIAPDME IYCLYGVGIP TERSYLYKLS PSSDRCNTNI 540
  541 PFQIDSSVAG SDHNDRGCLR GGVHFVDGDG SVPLLSAGFV CAKPWQGTTR FNPSGIPTYI 600
  601 REYQHKPPSS LLEGRGTQSG AHVDIMGNVA FIEDVLRVAA GSSGAQLGGN RVHSDIMKMS 660
  661 ERINIRL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle