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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7512168, gi|1...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLRVLTVII LLLVLCSYAD SQSGKKQGGR AKGGKYKDSG SDESRGARAK GGPAKGGPAK  60
   61 GGPAKGGPAK GGPAKGGPAK ATTAEAPATT VEPPAPTAET PVTDAAAPDT DSETPAATNS 120
  121 ETPAATDAET PATDTGAPAD EAPVEVKNEE PAVAAQESTT PASPEENGST GECGTWGQGT 180
  181 YKTLHGQMFH CKSKSTISFC RHCGDNAEFN VETKRKEEGH FEKLRFQIDG VEVEANDNDE 240
  241 IYINNKKISN EQYNDKQVRL RRNGIYMQFY NHQEDVKVTW HKNQFSLMLN KAYETCGLCG 300
  301 GSKDNTDDKT FFESQIIEKD GETEFITSDP EDEGTKYCSK IISKWFSSLD YGSASQEDYI 360
  361 KACACEHNSC TENDKRACTC STFMELARMS GNGGCSDSWR SWRQDEDVIC AVPLQCPENQ 420
  421 VYDECAPTFN PPCSNQAPLQ EKGVVAGCAC PEGLLVDDMG GGNKCVPKSS CPCTFRDNTY 480
  481 QSGETRESTC NSVCTCNGGT WTCSKGSCPG ICKVEEGVYV TTYDGITYSM HGNCVYIISM 540
  541 HTSWLVYAKL SQSQDAQSST IINSVSLVLN LGNQESTYTF NRDGSIINEK MTNQNVFQSD 600
  601 QLSISRSGTF IIVLTHLHVN LLIQTGTTMQ FYTSVPSTGY EDTEGPCGSF NHKADDDFMS 660
  661 NQKMPESSPE TFVGFWKMSS CSDPVKPTCI DLEKELFANQ QCSQLKDPNG AFAKCHSTVL 720
  721 YRSFYERCVH LTCISQDMTV SMCTELRNYA MACAEQGIYI HEWGNELCKE ECKNNQVLDY 780
  781 HYVSCYQTCF SISNGDSSCV PGGIKALLCG CSEGQYPNAD GVCVPKGDCD CHLNYDTLKA 840
  841 NETIVIDERE CACIDGRVQC TTKGENASEI CTGGAQFVDC NFPNSRKRTE LGCNSRHLKL 900
  901 PQGEGECKPG CYCPEPLVRD SKGECIDPSD CPCQYGGNDY ENGKIVRHSC DKCVCKKGTW 960
  961 DCTQNKCQTQ CHIYGDGQLH TFDGLWYNFD GVCQYVLVTD YCSEGNGTFR ISAQSVACCQ1020
 1021 DGLTCARKVV ISFQNTNIIL QDGQVKIEHS GDCSVSHSHD VYSVRKEGLF HLIMFKFGIT1080
 1081 VLWDGSTRVS TILDPELRGK VCGLCGNNNG DLKDDFMARD GSVAFEIVKF AKSWKTDPSC1140
 1141 RDSEVQIYPC DLNGYCKPWA LRKCQFIKED TFKACHKKVD PTPYYDACVR EACVCDLEGK1200
 1201 YLGFCTNVAM YAEACRRADV CIQWRTPELC PVYCDYYNQP GECTWHYKPC GSVPVKTCHN1260
 1261 QAMSSNFSKY LEGCYAKCSG KAAYLDENFM KCVPLSKCSC LYNGRVIPAN QAITDECGKK1320
 1321 CHCMKGSVTC TVPSVSSEES TPAPTETTVS SVPSEESTPA PTETTVPSEE STPAPTEITV1380
 1381 PSEESTPAPT ETTGESTPAP SETTGESTPA PSETTVPSVP SGESTPAPSE TTVPSGESTP1440
 1441 APSETTVPSE IEKGGCGDPG IPMYGKRNGS SFLHGDVLTF ECQASFELMG EKTIICQQNN1500
 1501 QWSGNT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle