YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47607439
Protein type:	Globular with Signal Peptide
Type Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALAARLVSR SRQLYSVQAA LANGGLTQVR SFAKEAAPVS GDDLLKGIFF EVKKKFETAL  60
   61 GVLKKEKITI DPDDPTAVAN YAQVMRTVRE KADLLNDSQR IKYTIETFTK GIPDARTYLD 120
  121 TLQQLRKKSG LIDDMGIEDM MMEALEKVEK DIKKPLLRSD KKNMNLLLAE FDKINKKLGI 180
  181 RKEDLPKIEE NLEMELAKAE LTELKKEVVE AMEGQLKREE FKDEGMPDVR KLDIRNFL

Type	Start	End	Confidence
Signal Peptide	1	27	0.62
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	238	0.99