YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|3297910
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQHRRNRQRG FTLMEIMVVI FIIGLLIAVV APSVLGNQDK AMRQKVMADL ATLEQALDMY  60
   61 RLDNLRFPSN EQGLAALVKK PEQAPLPRAW RSDGYVRRLP QDPWGTPYQY RMPGEHGRVD 120
  121 VYSLGADGVP GGEGQDADLG NWAL

Type	Start	End	Confidence
Cytoplasmic	1	10	0.88
Transmembrane Helix	11	35	0.82
Non-Cytoplasmic	36	144	0.95