YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|450346|emb|CA...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQWNSTAFHQ ALQDPRVRGL YFPAGGSSSG TVNPAQNIAS HISSISSRTG DPAPNMENIT  60
   61 SGFLGPLLVL QAGFFLLTRI LTIPQSLDSW WTSLNFLGGS PVCLGQNSQS PTSNHSPTSC 120
  121 PPICPGYRWM CLRRFIIFLF ILLLCLIFLL VLLDYQGFPG AMLSEVLLVS APGKVILHGE 180
  181 HAVVHGKVAL AVSLNLRTFL RLQPHSNGKV DLSLPNIGIK RAWDVARLQS LDTSFLEQGD 240
  241 VTTPTSEQVE KLKEVAGLPD DCAVTERLAV LAFLYLYLSI CRKQRALPSL DIVVWSELPP 300
  301 GAGLGSSAAY SVCLAAALLT VCEEIPNPLK DGDCVNRWTK EDLELINKWA FQGERMIHGN 360
  361 PSGVDNAVST WGGALRYHQG KISSLKRSPA LQILLTNTKV PRNTRALVAG VRNRLLKFPE 420
  421 IVAPLLTSID AISLECERVL GEMGEAPAPE QYLVLEELID MNQHHLNALG VGHASLDQLC 480
  481 QVTRARGLHS KLTGAGGGGC GITLLKPGLE QPEVEATKQA LTSCGFDCLE TSIGAPGVSI 540
  541 HSATSLDSRV QQALDGL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle