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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|8572547
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKIYKVKKN AAGHLVACSE FAKGHTKKAV LGSLLIVGAL GMATTASAQA TNSKGTGAHI  60
   61 GVNNNNEAPG DYSFIGSGGY NKAEGRYSAI GGGLFNKATN EYSTIVGGGY NKAEGRYSTI 120
  121 GGGSNNEATN EYSTIVGGDD NKATGRYSTI GGGDNNTAEG EYSTVAGGKN NQATGTGSFA 180
  181 AGVENQANAE NAVAVGKKNI IEGENSVAIG SENTVKTEHK NVFILGSGTT GVTSNSVLLG 240
  241 NETAGKQATT VKNAEVGGLS LTGFAGESKA ENGVVSVGSE GGERQIVNVG AGQISDTSTD 300
  301 AVNGSQLHAL ATVVDDNQYD IVNNRADILN NQDDIKDLQK EVKGLDNEVG ELSRDINSLH 360
  361 DVTDNQQDDI KELKRGVKEL DNEVGVLSRD INSLHDDVAD NQDDIAKNKA DIKGLNKEVK 420
  421 ELDKEVGVLS RDIGSLHDDV ATNQADIAKN QADIKTLENN VEEELLNLSG RLLDQKADID 480
  481 NNINNIYELA QQQDQHSSDI KTLKNNVEEG LLDLSGRLID QKADIAKNQA DIAQNQTDIQ 540
  541 DLAAYNELQD QYAQKQTEAI DALNKASSEN TQNIAKNQAD IANNINNIYE LAQQQDQHSS 600
  601 DIKTLAKVSA ANTDRIAKNK AEADASFETL TKNQNTLIEQ GEALVEQNKA INQELEGFAA 660
  661 HADIQDKQIL QNQADITTNK TAIEQNINRT VANGFEIEKN KAGIATNKQE LILQNDRLNR 720
  721 INETNNRQDQ KIDQLGYALK EQGQHFNNRI SAVERQTAGG IANAIAIATL PSPSRAGEHH 780
  781 VLFGSGYHNG QAAVSLGAAG LSDTGKSTYK IGLSWSDAGG LSGGVGGSYR WK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle