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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|19068022
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPRYHRTPS PGQPLQHGYQ LEDNPFNNNA AYQPPPQHDP YGHTSPHQQL DVPMGPPARY  60
   61 GTPSDQLPLN AAHSVSNLSG YDTPVNHGDY GVNPEAHHDA YYNQPYEPSP HDPSVPYDQP 120
  121 TGYSEYDDNR PMLPHQDTTD GYQDNPTPQP AGGLKRWKTV KQVLLYRGNL VLDCPVPPRL 180
  181 LNQIPHGERD EFTHMRYTAA TCDPNYFYDD NFTLRQKLFS KPRHTELFIV VTMYNEDEIL 240
  241 FARTMIGVLK NVEYMCNRKE SKTWGKDAWK KIVVCVVSDG RAKINPRTRA LLAGMGVYQE 300
  301 GIAKQQVNGK DVTAHIYEYT SQVGMMIKND VVTLVPKQQP VQMLFCLKEK NQKKINSHRW 360
  361 FFQAFGRVLD PNICVLIDAG TKPGGNSIYH LWKAFDLEPM CAGACGEIKA MLGTGGKHLL 420
  421 NPLVATQNFE YKMSNILDKP LESAFGFISV LPGAFSAYRY VALQNDKNGQ GPLEKYFAGE 480
  481 KLEGAGAGIF TSNMYLAEDR ILCFELVTKR NCHWILQYVK SATGETDVPD TVTELVLQRR 540
  541 RWLNGSFFAG IYAIAHFYEF FRSDHSMLRK LMFFVEFVFN TINLIYAWFA IGNFFLVFKI 600
  601 LTTSLGDDNL LGRTGEILGV VFTWVYGIAL ITCFVLAMGN RPAGSGPYYI TMVYFWAFIM 660
  661 IYLLFAAVFI AVKAIIADVH DSNGFNITDL FKNPVFYTLI ISVMSTYGIW LIASLLMFDP 720
  721 WHMITSFVQY MLLTPTYTNI LNVYAFCNTH DISWGTKGDD KAESLPTVST KDGSGKTDLP 780
  781 DEADLNAQYE RELTVFSTKF VKEVKAPTES QLAEAQMDYY RGVRSVVVLA WMISNFGLAA 840
  841 VVLSAAGLER INPAANSTDD VDGRANIYMS VVLWSVAGLS SFKFIGAMWF LVVRMFRGV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle