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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6969231
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNHRQDEFVR FQDWKSERSS EGNFHAKGGV HRSKVVIASD ELHNRLESGK WRAKGIIQAV  60
   61 KSSLSGFVEE SLGSKKNILD PQGPFLRKWN KIFVLSCVIA ISLDPLFLYI PVIDNDNKCL 120
  121 GLNRTLEVTA SVLRSFTDIF YFLHIALQFR TGFIAPSSRV FGRGVLIEDA WEIAKRYLST 180
  181 YFLIDILAVL PLPQVVILII IPKLRGSRSL NTKNLLKSVV FFQYIPRVLR VYPLYREVTR 240
  241 TSGILTETAW AGAAFNLFLY MLASHVLGAF WYLFSIERET TCWKQACGNS SPCHHASLYC 300
  301 DDDHTKFKTL LNSSCPIETP NATLFDFGIF LGALQSGVVG PMDFPQKFFY CFWWGLQNLS 360
  361 SLGQNLQTST FIWEMCFAVF ISIAGLVLFA FLIGNMQTCL QSSTLRLEEM RVKRRDAEQW 420
  421 MSHRLLPENL RERIRCYEQY RWQETRGVDE ENLIHNLPKD LRRDIKRHLC LALLMRVPMF 480
  481 EKMDEQLLDA LCDHLKPVLF TKDSFIVREG DPVDAMLFVM RGKLLSVTTN GGRTGFFNSE 540
  541 HLKAGDFCGE ELLTWALDPN SSTNLPISTR TAQALSEVEA FALVADDLKL VASQFRRLHS 600
  601 KQLRHTFRFY SGQWRTWAAC FIQAAWRSYC RKNVEESLRD EENRLQDALA NEGGSSPSLG 660
  661 ATFYASRFAA NVLHALRRNT AKKARVPDRI SPILLQKPTE PDFTAEDN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle