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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RBOHB_ORYSJ
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADLEAGMVA AATDQGNSTR SQDDAATLIP NSGNLGSSNR STKTARFKDD DELVEITLDV  60
   61 QRDSVAIQEV RGVDEGGSGH GTGFDGLPLV SPSSKSGKLT SKLRQVTNGL KMKSSSRKAP 120
  121 SPQAQQSAKR VRKRLDRTKS SAAVALKGLQ FVTAKVGNDG WAAVEKRFNQ LQVDGVLLRS 180
  181 RFGKCIGMDG SDEFAVQMFD SLARKRGIVK QVLTKDELKD FYEQLTDQGF DNRLRTFFDM 240
  241 VDKNADGRLT AEEVKEIIAL SASANKLSKI KERADEYTAL IMEELDPTNL GYIEMEDLEA 300
  301 LLLQSPSEAA ARSTTTHSSK LSKALSMKLA SNKEMSPVRH YWQQFMYFLE ENWKRSWVMT 360
  361 LWISICIALF IWKFIQYRNR AVFGIMGYCV TTAKGAAETL KFNMALVLLP VCRNTITWIR 420
  421 SKTQVGAVVP FNDNINFHKV IAAGVAVGVA LHAGAHLTCD FPRLLHASDA QYELMKPFFG 480
  481 EKRPPNYWWF VKGTEGWTGV VMVVLMAIAF TLAQPWFRRN KLKDSNPLKK MTGFNAFWFT 540
  541 HHLFVIVYTL LFVHGTCLYL SRKWYKKTTW MYLAVPVVLY VSERILRLFR SHDAVGIQKV 600
  601 AVYPGNVLAL YMSKPPGFRY RSGQYIFIKC TAVSPYEWHP FSITSAPGDD YLSVHIRTRG 660
  661 DWTSRLRTVF SEACRPPTEG ESGLLRADLS KGITDEKARF PKLLVDGPYG APAQDYREYD 720
  721 VLLLIGLGIG ATPLISIVKD VLNHIQGEGS VGTTEPESSS KAKKKPFMTK RAYFYWVTRE 780
  781 EGSFEWFRGV MNEVSEKDKD GVIELHNHCS SVYQEGDARS ALIVMLQELQ HAKKGVDILS 840
  841 GTSVKTHFAR PNWRSVFKKV AVSHENQRVG VFYCGEPVLV PQLRQLSADF THKTNTRFDF 900
  901 HKENF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle