YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47524507
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALLQIFLFV ALVLSFCFSI QLAGLSRPLL DEDSMRHEEW MSQHGRVYAD EQEDHKNKRF  60
   61 NVFKENVERI EEFNDGKTFK LAINQFADLT NEEFRASYNG FKGPMVLSSQ ITKPTPFRYE 120
  121 NVSSALPVSV DWRKKGAVTP VKNQGQCGCC WAFSAVAAIE GITQISTGKL ISLSEQELVD 180
  181 CDTKGIDHGC EGGLMDTAFE FIINNGGLTT ESNYPYKGED GTCNFNKTNP IAVSITGYED 240
  241 VPANDEQALM KAVAHQPVSV AIEAGGSDFQ FYSSGVFTGE CGTELDHAVT AVGYGESEDG 300
  301 SKYWIVKNSW GTKWGESGYI EMQKDIKVKQ GLCGIAMQAS YPTA

Type	Start	End	Confidence
Signal Peptide	1	23	0.94
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	344	0.99