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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47498983
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.96
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLFLPLLLL LLPPLPTTLS LNQEGLYLQH FKLSLDDPDS ALSSWNDADS TPCNWLGVSC  60
   61 DDASSSYPVV LSLDLPSANL AGPFPTVLCR LPNLTHLSLY NNSINSTLPP SLSTCQNLEH 120
  121 LDLSQNLLTG GLPATLSDVP NLKYLDLTGN NFSGPIPDSF GRFQKLEVLS LVYNLIESTI 180
  181 PPFLGNISTL KMLNLSYNPF HPGRIPAELG NLTNLEVLWL TECNLVGEIP DSLGRLKNLK 240
  241 DLDLAINGLT GRIPPSLSEL TSVVQIELYN NSLTGELPPG MSKLTRLRLL DASMNQLSGQ 300
  301 IPDELCRLPL ESLNLYENNL EGSVPASIAN SPNLYEVRLF RNKLSGELPQ NLGKNSPLKW 360
  361 FDVSSNQFTG TIPASLCEKG QMEEILMLHN EFSGEIPARL GECQSLARVR LGHNRLSGEV 420
  421 PVGFWGLPRV YLMELAENEL SGPIAKSIAG ATNLSLLILA KNKFSGPIPE EIGWVKNLME 480
  481 FSGGDNKFSG PLPEGIARLG QLGTLDLHSN EVSGELPVGI QSWTKLNELN LASNQLSGKI 540
  541 PDGIANLSVL NYLDLSGNRF SGKIPFGLQN MKLNVFNLSY NQLSGELPPL FAKEIYRSSF 600
  601 LGNPGLCGDL DGLCDGRAEV KSQGYLWLLR CIFILSGLVF IVGVVWFYLK YKNFKKANRT 660
  661 IDKSKWTLMS FHKLGFSEYE ILDCLDEDNV IGSGASGKVY KVILSSGEVV AVKKLWRGKV 720
  721 QECEAGDVEK GWVQDDGFEA EVETLGRIRH KNIVKLWCCC TARDCKLLVY EYMQNGSLGD 780
  781 LLHSSKGGLL DWPTRFKIAL DAAEGLSYLH HDCVPPIVHR DVKSNNILLD GDFGARVADF 840
  841 GVAKEVDVTG KGLKSMSIIA GSCGYIAPEY AYTLRVNEKS DIYSFGVVIL ELVTGRLPVD 900
  901 PEFGEKDLVK WVCTTLDQKG VDNVVDPKLE SCYKEEVCKV LNIGLLCTSP LPINRPSMRR 960
  961 VVKLLQEVGT EKHPQAAKKE GKLTPYYYED VSDHGSVA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle