YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|8132780
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIDRRQQPQ QVEQTRGEYV RRSLASRFKP QNRDGAYQRS QRQTKREAES STGSVNLYGG  60
   61 EPLGIFKDTQ LPISNDILST WSQLSERELS LQASHPPANY FEQMVLWTDQ KKVWRFPINN 120
  121 EQDWEDEHNV DFSEHIFLEQ HLEDFERKRK PQLGIQQYSI FTVKFNRLLP FLVPLFGSYI 180
  181 CYFIILLLFV RVCRNRSDDS ANQPIRFGSL FLLLGLCFSF IYHATRFHRR FLFWYTW

Type	Start	End	Confidence
Non-Cytoplasmic	1	168	0.77
Transmembrane Helix	169	193	0.85
Cytoplasmic	194	204	0.72
Transmembrane Helix	205	225	0.92
Non-Cytoplasmic	226	237	0.72