YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|8132107
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVVLLTAAL LALSSAQGTD EEVNNAETSD VPADSEQQPV DSGSDPPSAD ADAENVQEGE  60
   61 SAPPANEEPP ATSGSEEEQQ QQESTQAENQ EPPATSGSEE EQQQQESTQA ENQEPPATSG 120
  121 SEEEQQQQEP TQAENQEPPA TSGSEEEQQQ QESTQAENQE PSDSAGEGQE TQPEEGNVES 180
  181 PPSTPENSQE QPQQTNPEEK PPAPKTQEEP QHYRGRPPKK IFPFFIYRGR PVVVFRPRRP 240
  241 RNPFARRF

Type	Start	End	Confidence
Signal Peptide	1	18	0.98
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	248	0.99