YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67594907
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMAEQVDQE LMYTKFVRLL LGSKTGVRTK GAIEVGRRAV DYFRGIEFIR WMRKNEDHIK  60
   61 ESYPEVVKNI SFESINDLNQ VGTELIRRSF IVRAEYKPVG TNTGDLKIPK WPKRLCVTSN 120
  121 QNFDEHSFYI ITFDSNKTMS NILMISILVS VVALFMFPAW PLAIKISVWY ISVVFLSAML 180
  181 IVFFGRLIVF AFLWFFGFDF WILPNLFDED TGVIDSFKPL YSIIRRGDDW FMLSIRVFCA 240
  241 IFLAGAIYQL SKTHTASDVG QFARQSFLDV LDWGHRKISP PEDFTPTLHN SNMGSNEHIG 300
  301 ERNLSNEEHI CITRCLRFES KDAILDECAT DCHCLSELLS LPCLKSRSIC PSEFEEELNN 360
  361 AMAKNCQSNQ EKNEL

Type	Start	End	Confidence
Cytoplasmic	1	140	0.72
Transmembrane Helix	141	162	0.90
Non-Cytoplasmic	163	170	0.53
Transmembrane Helix	171	196	0.85
Cytoplasmic	197	229	0.68
Transmembrane Helix	230	250	0.84
Non-Cytoplasmic	251	375	0.66