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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54656527
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYFLVKLLAQ IITRTFFKNV TVLGKERIPL YGPVLFVGNH MNQFVDAAML IAIFPRQIRF  60
   61 LIAEASFKRP IIGRLAQSAG CIPVQRPQDL RYRGIGGLIW SSSSDVRIRG IKTRFKIDVK 120
  121 FQDTLIIDDL GVSRKVLEVV SDDEIIIDKG IGIEYSATYT DGFPFFIMPK IDQSTVYEEV 180
  181 SDAMRNGHSI GIFPEGGSHD RTTLLPLKPG VAVMALSSVL EGAEDLLIVP VGLNYYEPHK 240
  241 TLSSAVVEIG QPIPVTLELA QKYEESPSDA VKELLSMVEK GMNSVLLSAR DYTTLTCIRL 300
  301 CVQLYPPDRT ALSQDNYYLL HQLFSQFFWA LHDDPELEHL RKDLCEYEDT INHYGVPDRE 360
  361 VWQLKQPVYE CIKLIITKFL LLILVSIVGG SFFPLWAPIR YIPAFMAERH RKKALANSKV 420
  421 KIRGTDVLAS YRILVIIALL PILTVFYGIF FSLAFMHGQN LNSKIATVIG VFIMLPPLFY 480
  481 ISRVSFEMIM PLTRNIRTLF YVVVSNINYL RGTERTLLHM RIKLQQKIRD LVYTKGPQVS 540
  541 PNFIQSFTTV VPDAVIQADN KRINYSLGEY VPVVTRAKYD AREEIL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle