YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47523808, gi\|...
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAPLLPPAP VVLSLLILCS AHYAAGLDVN GTSSGKGEPF SGDHGAEAFE VTSRSEMSSG  60
   61 SEAPPASEMP SGSDYDYAEE YDNEPHISGY IVDDSVRVEQ VVKPKRNRTE SENTSDKPKR 120
  121 KKKGGKSGKN RRNRKKKNPC DAEFQNFCIH GDCKYIEHLE AVTCKCYQDY FGERCGEKSM 180
  181 KTHTMVHSDL SKIALAAIAA FVSAMSFTAI AVVITIYLRK RYFREYEGAA EERKKLRQEN 240
  241 ANAHAIA

Type	Start	End	Confidence
Signal Peptide	1	24	0.97
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	193	0.99
Transmembrane Helix	194	217	0.92
Cytoplasmic	218	247	0.97