YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37786769
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPVAVLTLC LSSAVLSAPS LDPQLDQHWN LWKSWHSKNY HQREEGWRRL VWEKNLKKIE  60
   61 LHNLEHSMGK HSYRLGMNHF GDMTHEEFKQ IMNGYKHKAE RKFKGSLFLE PNFLEAPRSV 120
  121 DWREKGYVTP VKDQGECGSC WAFSTTGALE GQEFTRTGKL VSLSGQNLVE CSRPEGNEGC 180
  181 NGGLMDQAFQ YVKDNQGLDS EDSYPYLGTD DQPCHYDPKF SAANDTGFVD IPSGNERALM 240
  241 KAVASVGPVS VAIDAGHESF QFYQSGIYYE KECSSEELDH GVLAVGYGFQ GEDVDGKKFW 300
  301 IVKNSWSENW GDKGYIYMAK DRKNHCGIAT AASYPLV

Type	Start	End	Confidence
Signal Peptide	1	17	0.99
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	337	0.99