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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|8099700
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLYRVSGFYK RHTRNFTNID YGYYIRNFIH HIASKIYPYA KVVLPNFRAA HYFYILTLVI  60
   61 LGSILVYPVK TCAYIDVLFF TAGASTQAGL NTVNVNDLSL YQQIVLYLLA TLATPIFIHG 120
  121 SLLFVRLYYF ERHFDNIKER SLMDYRMRKS ATLARLGSAP TMSSTRLNTF NNQVLGFQER 180
  181 EAEKGSSSSP QSSSSQTSQP VSTAYNDQGG NDIEHHSEPS DSDDDESGNG PVTFQEKIHF 240
  241 EEPQRPRSQR RHSRTDSGIK FSALPHPRRR KSIDPEDMYR SINMLQEHKK NQEAKSKGIQ 300
  301 FLNIGSPVRR KSRSSNIEAF PEEDTNPSRD DEITPATNSV GTGNNDEDED DILIIKPPIE 360
  361 IENSDGANPI FTKKKKLASQ IQFKETPGKA KKWITTKKRK HYNPWTSKLK KTLSNSSKKG 420
  421 SLSVVPTDTE DDSEDEEYAS IDSETSDISD NEHAADNAEG SDVDSVGSYE EDEDEDEHNS 480
  481 DDDDDDDDGE GERRLGNGAS LTKAQSHLVL PSKDETGGKK YTKRSNTLDT PQQNTSDGRK 540
  541 IRKKAPKRKT PRTQRNASFN QHSNVSIGDG SIENVDTNDS YQRLSRTMSG NYLSWTPTVG 600
  601 RNSTFIKLTD EQKEELGGIE YRAVKLLIKI IVVYYVGFNI IPGVMLSIWI YCMPHYKNLM 660
  661 ISSSISPAWW AFFTSQSSFN DLGLTLTSNS MMSFNQNAFV QILCSFLIVI GNTGFPILLR 720
  721 FIIWVMFKTA RPLSLYKESL GFLLDHPRRC FTLLFPSVPT WWLFFILVVL NGFDLVIFCI 780
  781 LDLHDDTFKG VDMGYRVLNG LFQAFCTRTV GFSVMDLSQL HAATQVSYLI MMYISVLPIA 840
  841 ISVRRTNVYE EQSLGVYAKE NAEGVDESAP SNYVGSHLRN QLSYDLWYIC LGLFIICIAE 900
  901 GKRLKEQDLR FSIFAVLFEI VSAYGTVGMS MGYPGVDCSL SGEFNVISKL VIIAMMIRGR 960
  961 HRGLPYTIDR AIMLPNAAMK RHDRLQEEHA INRHNTMERT TTLGRVATFG NGPIDGGNNL1020
 1021 LTRAITNIEH RLRNRRDGRS ESSTVSEDPR YVVRTVSEV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle