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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ABCD2_DICDI
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.44
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEANFVSSAL AGVQNNRSVK RSLDRLKSLF SSGQHQLNGS LGKKVFILLA LGGGAFSLVK  60
   61 FYKAKNEGSS KQSGLIIDLK DKNSKKDKKR NVTRVDAVFF RRLAKIIRIV IPSLKSKEFL 120
  121 SLLYLTALLF ARTMLSVSIA EIAGKNAQNL VARKWKEMRN GVLKFALVSI PASFVNASLK 180
  181 YETDMLALRF RKRLSEYVHK EYLEGVNFYK ASHLGGADRI DNADQRVTSD IEQFCNSMSS 240
  241 LYTTLFKPFL DLVLFTRKLV VVMGWGSPLL MFSYFIVSGF LKKLIMPPFG RLTAKQSELE 300
  301 GNYRTVHQRL ITNAEEIAFY DGSRKERQII NLSFGDIYNH TGYVSYLKCL VGIFDGFLVK 360
  361 YCASIVGYGC MVLPIYTGIR GSSGKDSTEL TKDYIRNTQL MVALSQAIGQ LVLLGNKVTL 420
  421 MAGYTSRVSE LLEMIKSIKE RGTSQFTIVH EDDVPNPLTN SPVNDKYDTS VDMSSWLEDW 480
  481 RKRSDQTRIV KRQQSNRSSA SGATTVYGGG TFVEGDFIKF ENVSIVSPEG KLLVENLDFQ 540
  541 VMPNQNVMIT GPNGSGKSSL FRILGELWPL HCGTVIKPRK EDILFVPQKP YLVLGTLRDQ 600
  601 IIYPHSHDDM KKLGVTDDDL QHLLATVDPN LTIIRQWNWD DTKDWFTALS GGQKQRIAMA 660
  661 RLFYHRPQYA ILDECTSAVS DEVEGKIYET CKKLGITLFT VSHRPQLRAY HDYVLLFNGR 720
  721 GGWEWSKIDH DDDHLKKPLS H

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle