YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|125986712, gi...
Protein type:	Transmembrane
Type Confidence:	0.90
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LYCYGLLATV SGLSFTVTSR IFMDVKHNKQ PIGRITFGLF GKLAPKTVAN FRHICLRGIN  60
   61 GTSYVGARFH RVVDRFLVQG GDILHGDGTG SISIYGDYFE DEDKALAVEH NRPGYLGMAN 120
  121 RGPDTNGCQF YVTTVGAKWL DGKHTVFGKV LEGMDTIYAI EDVKTDTDDF PVQPVVISNC 180
  181 GEIPTEQFEF YPDDYNILGW IKAAGLPVTS SFLVLLIFHY FFRQLNMYC

Type	Start	End	Confidence
Cytoplasmic	1	197	0.58
Transmembrane Helix	198	222	0.78
Non-Cytoplasmic	223	229	0.65