YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|54645128\|gb\|E...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLRLLLAVF VCFADAYRPV VILHGILSGA DSMDFLVREI EELHRGTIVY NCDKFSGWYS  60
   61 LENAWRQVEQ IRDYLSDVGK KHPEGINVLG YSQGGLLARA AIQSLPDHNV KTFISLSSPQ 120
  121 AGQYGTSFLH LIFPDLAAKT AFELFYTTVG QHTSVGGYWN DPHKQSLYLK YSEFLPLINN 180
  181 EKQSSNSTSF KMGMVRLSKL VMVGGPNDDV ITPWQSSHFA YYDEDLDVIP FNKRKLFTDD 240
  241 LIGTRTLQEA GKLIIIVKPH VHHLAWHTNR AVIHQVILPY LD

Type	Start	End	Confidence
Signal Peptide	1	16	0.98
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	282	0.99