YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|125984784, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAIGERFQA AVNVIKGLPK NGPYQPSTSM MLKFYGLFKQ ATEGACDHKK PGFWDVVGKA  60
   61 KWDAWNDNRH LSKEQAMQRY VESLQEIIET MSFTENVQNF VGSLDGLGNI NLDELELVSP 120
  121 GMRELAESHP NSPFHSRTNS PQHGTSCNGE DEPGPPLASS EPITENGGNI VTNGHITPSL 180
  181 SNGYTTKATN YTHDSHNYTN NSSVAIVEPS DDEYDDPYDL SHEVTQAIAH NTDLLRQIQI 240
  241 TITRMNNDVG AVQQRVRSLE QTINELRDGQ KSRASHRQQP VWWPFKNISP LWFAVLILWP 300
  301 FLVRRFGRML QTSSGRR

Type	Start	End	Confidence
Non-Cytoplasmic	1	281	0.93
Transmembrane Helix	282	303	0.87
Cytoplasmic	304	317	0.83