YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|54644437\|gb\|E...
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALRLINHAM LRQLAAQLPR NAQVGSVASV HTLDKIGKRE VVGYGWNGTA CYADRVDYPM  60
   61 PAVRFREPNN EINALRAKEQ GDWKKLSPQE IKALYRASFC QTIAEVQAGT GEWKQHLGVS 120
  121 LLFCAGAIWI AILMNLFVYD ELPVTFDEEH QKAQLKRIID LEMNPVTGLT SKWDYETKQW 180
  181 KN

Type	Start	End	Confidence
Cytoplasmic	1	116	0.88
Transmembrane Helix	117	138	0.85
Non-Cytoplasmic	139	182	0.92