YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|54644431, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRFNPQLSH GCALALICCL LNLLMMHQPT NAELSPVVQG EFFLPILPDD HPPNTDTSFG  60
   61 GPISNLYDNL LQREYAGPVV FPNHQVERKA QRSPSLRLRF GRSDPDMLNN IVEKRWFGDV 120
  121 NQKPIRSPSL RLRFGRRDPT LPQMRRTAYD DLLERELTLN NQQQQQLGDT ADDLSADYDG 180
  181 LYERVVRKPQ RLRWGRSVPQ FEATIGDNDQ LYNSLWNSEK MRRMLLALQQ YEAAPGHVAG 240
  241 YANDGDDTEA QLDEDTSEFQ REARKPMRLR WGRSTGKAPA TEQK

Type	Start	End	Confidence
Signal Peptide	1	32	0.99
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	284	0.99