YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|54644377, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTELLIDPDI RVWVFLPIVL ITFLVGIVRH YVSILISTQK KAEITQIQDS QAMIRARLLR  60
   61 ENGKYLSAQS FSMRKNYFNS EETGYFKTQK RAPVAQNSSA MLTDMVKGNF INVLPMVVIG 120
  121 GWINWMFSGF VTTKVPFPLT LRFKPMLQRG VELASLDAAW VSSASWYFLN VFGLRSIYTL 180
  181 VLGENNHADQ TQAQADAMTG AAMTMPQDPK AAFKAEWEAL EITEYHNALK NIDADMLNIV 240
  241 AA

Type	Start	End	Confidence
Non-Cytoplasmic	1	11	0.66
Transmembrane Helix	12	32	0.92
Cytoplasmic	33	109	0.69
Transmembrane Helix	110	131	0.81
Non-Cytoplasmic	132	155	0.65
Transmembrane Helix	156	174	0.53
Cytoplasmic	175	242	0.58