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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125983768, gi...
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.30
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNGPSCRSK PIEHHVMPKR RKEKKENVGG KAANQKNNRK QRTKKKRRKK RRTKKQKEET  60
   61 QSSNSNKNDQ LCKRVTVRRQ SASQQRSESD REIRSHRHRE SGAVTAGESG TATERERAAA 120
  121 PAAAFMRPLP QQRPQAAGPN LRDVRCADLA ISIPNNPGLD DGASYRLDYS PPFGYPEPNT 180
  181 TIASRDIGDE IQFSRALPGT KYNFWLYYTN FTHHDWLTWT VTITTAPDPP SNLSVQVRSG 240
  241 KNAIILWSPP TQGSYTAFKI KVLGLSEASS SFNRTFQVND NTFQHSVKEL TPGATYQVQA 300
  301 YTIYDGKESV AYTSRNFTTK PNTPGKFIVW FRNETTLLVL WQPPYPAGIY THYKVSIEPP 360
  361 DANDSVLYVE KEGEPPGPAQ AAFKGLVPGR AYNISVQTMS EDEISLPTTA QYRTVPLRPL 420
  421 NVTFDRDFIT SNSFRVLWEA PKGISEFDKY QVSVATTRRQ STVTRSNEPI AYFDFRDIAE 480
  481 PGKTFNVIVK TVSGKVTSWP ATGDVTLRPL PVRNLRSIND DKTNTMVITW EADPASTQDE 540
  541 YRIVYHELET FNGDTSTLTT DRTRFTLESL LPGRNYSLSV QAVSKKMESN ETSIFVVTRP 600
  601 SSPIIEDLKS IRMGLNISWK SDVNSKQEQY EVLYSRNGTS EVRTLITKES RLVIKNLQPG 660
  661 AGYELKVFAV SHELRSEPHA YFQAVYPNPP RNMTIETVRS NSVLVHWSPP ESGEFTEYSI 720
  721 RYRTDSEQQW VRLPSVRSTE ADITDMTKGE KYTIQVNTVS FGVESPVPQE VNTTVPPNPV 780
  781 SNIIQLVDSR NITLEWPKPE GRVESYILKW WPSDNPGRVQ TKNVSENKSA DDLSTVRVLI 840
  841 GELMPGVQYK FDIQTTSYGI LSGITSLYPR TMPLIQSDVV VANGEKEDER ETITLSYTPT 900
  901 PQSSSKFDIY RFSLGDAEIK DKEKLANDTD RKVTFTGLVP GRLYNITVWT VSGGVASLPI 960
  961 QRQDRLYPEP ITQLHATNIT DTEISLRWDL PKGEYNDFDI AYLTADNLLA QNMTIRNDIT1020
 1021 ISDLRPHRNY TFTVVVRSGT ESSVLRSSSP LSASFTTNEA VPGRVERFHP TDVQPSEINF1080
 1081 EWSLPSSEAN GVIRQFSIAY TNVNNLTDAG MQDFDSEESI GVIKNLKPGE TYVFKIQAKT1140
 1141 AIGFGPEREY RQTMPILAPP RPATQVVPTE VYRSSSTIQI RFRKNYFSDQ NGQVRMYTII1200
 1201 VAEDDAKNAS GLEMPSWHDV QSYSVWLPYQ AIDPYYPFEN RSVEDFTIGT ENCDNHKIGY1260
 1261 CNGPLKSGTT YRVKVRAFTG PDKFTDTAYS FPIQTDQDNT SLIVAITVPL TIILVLLVTL1320
 1321 MFYKRRRNNC RKTTKDSRAN DNMSLPDSVI EQNRPILIKN FAEHYRLMSA DSDFRFSEEF1380
 1381 EELKHVGRDQ PCTFADLPCN RPKNRFTNIL PYDHSRFKLQ PVDDDEGSDY INANYVPGHN1440
 1441 SPREFIVTQG PLHSTRDDFW RMCWESNSRA IVMLTRCFEK GREKCDQYWP NDTVPVFYGD1500
 1501 IKVQILNDSH YADWVMTEFM LCRGSEQRIL RHFHFTTWPD FGVPNPPQTL VRFVRAFRDR1560
 1561 IGAEQRPIVV HCSAGVGRSG TFITLDRILQ QINTSDYVDI FGIVYAMRKE RVWMVQTEQQ1620
 1621 YICIHQCLLA VLEGKENIVG PAREMHDNEG YEGQQVVQLD ENGDVVATIE GHLSHHELQQ1680
 1681 AEAEAIDDEN AAILHDDQQP LTSSFIGHKS LNLPTTTDNN NSVVIVLVDN KPSSMICKDS1740
 1741 KSNLDIIDPK HQQHLHQHQP QPPSCTSIGG GHGNGYNTLQ HRRKSQLITF SSSSCDIKNS1800
 1801 LSHEHISNGG TGGTGSNRAS RANVRLSFAE EDVMIIPQQH PQHTQHTQHP QDDEVFVRRR1860
 1861 SLLEVELGVE DHDEEDVELY MHDEFETHID AKSNNANDDS GGGSYEDSHA LHSSLGGSNR1920
 1921 NSLEKDDDDI EVDVISTDVS CYDQLLGSSC NTRNGDDDDI ATLMGDADSN YATTKLCKTS1980
 1981 LHHGILAGAG AGAGAGSAMG DDEGIAESGM 

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