YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|54643960, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSGNCGTLKS TAKLLPLQLM ASAGPPPNHP PSMSLPPASA AASIQAQAQA QAQAQAQAQQ  60
   61 QQQQRHRRRH GWCGCFGSGG RNTRPVEKTT PPPPGYTTKS KKRKPKSQTV WSALLTNLGI 120
  121 CMLLLAYTLL GK

Type	Start	End	Confidence
Cytoplasmic	1	108	0.97
Transmembrane Helix	109	130	0.94
Non-Cytoplasmic	131	132	0.83