YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|54643921, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATAVPHVPP KQDLPPAGGY KKIPFARVPP KSYFTGFTMI GTYVAVTTVG LGIYYLTAKK  60
   61 VKRDEIEMRS AQNVIFPILI AERDREFLRQ LRRNRDEEAE LMKNVPGWEV GTWYGEPVFK 120
  121 TLPEDTLVTP IFKEFYAHAD WKSYAKRAHI KLWS

Type	Start	End	Confidence
Non-Cytoplasmic	1	33	0.85
Transmembrane Helix	34	58	0.81
Cytoplasmic	59	154	0.78