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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125983108, gi...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLLSDPSIS TQNKLVDSLA KHVRKVCSGF YVLGVVWLAC LALPEFNHGT YLSENALSPG  60
   61 LVYPEIRIDS NRLASQLLEE LQRERKEHQS TTPHAWITAK FNEFGLETHT HNYTLRYPFG 120
  121 GGKEYHGKNI YGILRAPRIA STEGIVFTAP YRAPTSVHPD ISPSVPLLLA FADFARRKNY 180
  181 WAKDLIFLVT EQEQLGMQAW LEAYHDGDRV MNVSKAYLLP GNLPARAGSL QAALNIEVQD 240
  241 LEIDYVDVKI EGLNGKLPNL DMFNLVQRIM AREGITSGYK QTLRKKRRSN PTVFEKNLRQ 300
  301 MLSMLATQSS GVPNGNHGLF HRYRIDALTI AAAKRQTHAT LKGNAGSAAV PLLKAIEGIA 360
  361 RSLNNLLERF HQSFFFYVIV NNDRYISIGD YMPALVALVA CAFFKAYLTW STLDFELQPA 420
  421 ATATASAETQ SGSEPDTAVE DGLPYGSVLI YLTAVLLIGY LGNVLPLQQY FLEIPMGAAP 480
  481 LTTSVLSFLT LIGFILPFVV VLPAGGLELL HVGFLLIFGC SLIVIGLLNF ALGFFVAVLT 540
  541 VPVVIALETS EKNWNGSMRN LTRLITVLLN PMVVVYLIVL CMSFYQFPEL KLDKLLLRAA 600
  601 TAAMDASAYG LIDCVIYGNW LYFVVSTVFL PLWILCWTLA LSKRREIADY SDNEEAQRRK 660
  661 PKPQPQTKLK TN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle