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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125983050, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVIAPRGSS TSAAGSGSLY GTSSSTSGGN GAGNSSSGSG ATGSASGGAT TNGYSRCNTY  60
   61 YDRGSSLSKF LPPSGGSVSS TGYSSASSCY PSSYLAASYA PRSTLHRNSV GSTSASYLSG 120
  121 GSVSSPSYRI SSAYLSGSTY DSPTYGRYGV RSVSGSGSAT NGESGLKKND YGLRREAKKP 180
  181 PTSGGGNGNG SASSSSYSES AISNGHSKRL SSSSSSPSLA RLVATSGLDM YEKYSPANYK 240
  241 PNSEPSSRSR SGLSETPSGD VDGNGNGNDT TTCTVTLDRS RTSRYSRLYS NNSDAGDSTP 300
  301 STSTGTSTST TSSSRLGQRN GSGRFTLSSS NSSGDVPTAT FTLRSNRTRR SIADPPPPPP 360
  361 PPPPSALKSI NGHGADSNGL DTKLNGLSLL STSPKRNAIY ESRSGSSVRA TLDTTDDAGP 420
  421 DMEDADNGDV SATATFKLTE AGSKARNVVS TRNVLPPVSP TPSRYWERDS SNTTSRQYSS 480
  481 SNSSALSGSS KYNTDEGYRS AATQREEKSE GLCGLRNIGN TCFMNSVIQC LSHTTELTRF 540
  541 LRTHHGSRSS ATKDQLILFE FAKLIQEMWT SSVHTVTPMD LKRAFSAKHR MYSDYNQQDA 600
  601 QEFLRFFLDS LHSALNSGIK GETLNIDDNL SDNKKADLTW EWYTRHENSL VRDLFVGQLK 660
  661 STLKCTTCGN TSVTFDPFWD LSVPLPSSSR CKLEACLDLF IREEILDGDE MPTCSKCKTR 720
  721 RKCTKSFTIQ RFPKYLVIHL KRFSETRWSK LSNIVEFPTA DRDLNMASYG ANSNSNVHYS 780
  781 LYAISNHMGS TAGGHYTALC KHPVSRKWHE FNDNIVSDSV SENFLVSSSA YILFYERT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle