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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125982877, gi...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIAVAEPPRE FVPRGRQAAE EHPGPPDQPL SKYQPTEHFL LQRLQNVNIS AGGVTEEPQE  60
   61 FWSIREIYDD YEASYERTHR RTQLIEHAKK CGPKAAAATQ LSSLPRHLLN PEMEHREEPM 120
  121 CDYMVNNEEE LYVNKNTVIW TQGLGDADDG VYKRMCFTTD FPVKFACFLN RTFVRGRLAQ 180
  181 LKATIESDDD SLKAICVMDS DAMRVYCNDG EDFLASVEFP VAQLWQTKHG LLLEKDADNA 240
  241 LISNLSIPMP RLFSMSHPLH EACPVVLKTC TNATGYVIEP EYSVIYTTED SDLVLLYDAK 300
  301 FFKHFVTRLR KVTPEEVNLV QQDLGHTTIG PRSSSATSFS TPKATGTTPK VLPNVSGFLG 360
  361 RNNTTTTTTG GAHTHAPLGH NHSKFGLSQS QSFSGVLGQT KQVRASLGTP LSQLQSSFGQ 420
  421 SMSAKDMRKM SHVKPAKPIE PEMCLEHIWT ENTYGRQREF CEMATRGFIH TDLVGQTYMC 480
  481 YLLARSCRLQ MVRITGYGSP DVQLSTMAST LPAKDAVGLS RMHMIAVLDP GGSLILYTGT 540
  541 VLISKVHITP LLAPSVPSIS MVTPKVVPTA TGGGGCAKAT TSRSSFEEVR RSSLLPSKAP 600
  601 SDLASFDEEL HMLSPIAPQV VCYTPRQAHN ICKALRDPAG NRLTLVYATG RMLRIALPLL 660
  661 NDTRLVTRCI ATLRQVLNPT QFLHFIIRWY SARNPPGSRD LSSEQEWQIF RSTLLALMGC 720
  721 TAAPDMETSE TYGRCATPVP HSPQTEESGG AGGDCLSAGL QNEPKKRRKY NDCEEYTDED 780
  781 WEFLLLQTTL APCGSDGHSY SVDMSAPLFQ MIPAIFYSLH LLYEDLKLDV IFQAAESYLA 840
  841 GFLHQMAIDM QLDNYVLHYV LDFPELTHKT SKLSLLSFEH GAMMQHQELL RVPTPSVFGQ 900
  901 MEHIVMAREE VLPYSFIECI NERSRNMLQL LSLVLHGPER IKHWWQLLEL PEAVQSNYPK 960
  961 RPKRTITGGV SKYHQLLELL LAMRFKRQDI ERFPAAVHLI VADALEEARV APPISSSMSA1020
 1021 YDLILRPELA SHFTLAFLEK SIEQPHCGRL YKEDSLSARC AMSVGQEWMT TEPDANLRHD1080
 1081 DMDNMDTKLL RLRFPDDMRV EEVRRLLSSS EPVPIEVQQS PGTSDHEFIE EQEKQLFALC1140
 1141 ARTMTLPLGR GMFTLRTLLP KPSDSVPMPK LCLVGREPHK GTTIEMQQIE FPANMSMWPS1200
 1201 FHNGVATGLK VSPQAQDVDS TWIVYNKPKA QANNALEHAG FLMALGLNGH LKTLSFMSVY1260
 1261 KYLVKCDEMT NVGLLLGISA AHRGTMDTKI TKLLSVHLEA LLPATAMELD IPQSTQVAAL1320
 1321 MGIGMLYQGS AKRHIAEVLL QEIGRPPGPE MENCVERESY AMTAGLALGL VTLGQGESPA1380
 1381 GLRDLQLPDT LHYYMMGGVK RPITGSQKEK YRLASFQVRE GENVNIDVTA PGATLALGLM1440
 1441 FFNSGNTAIA EWMQPPDSRY LLDMVRPDFL LLRTIARGLI LWENVQPDNE WFQAQFPANL1500
 1501 RVHLRMPMRD DEPQAEDGDV DYEAITQAYC NIVAGAAFCI GLKYAGTENS VAFATLRAAI1560
 1561 KEFLGFPGTP MGEYAGRTTV ESCLMVLLIA ISLVFAGSGN CEILRIIRFL RSRVGPQYPH1620
 1621 ITYGSHMAIH MSLGLLFLGA GRFTIAQTPE SIAALVCAFF PKFPIHSNDN RYHLQALRHL1680
 1681 YVLAVEPRLF LPRDIDTHQL CLCNISVLEV GASELRRLPI APCILPELST LQKVVVDDEN1740
 1741 YWPVCFERSR NWHQLEKALE MSAPIDIKKR TGCLSHLEDP DRLKSMLAQT LTLEQSICWQ1800
 1801 IDTNDLKRFE AEVLVKPFIS RCLDVKGTQL SHEELVKRHQ LILLFYNAVV KDRMHLLPVY1860
 1861 LTLFDHVTKP MPNNTDVWQL KLIDSYLRRG KESDHPRLSV ELIQMMQEIF KQQMEASTTQ1920
 1921 LCIPLRAFLS QKRLEPSYVA TISGPDLQRV FCLINYYNLM PNMLTGVDLS GGSVNYLRLL1980
 1981 FVFRQLNLGP NTVFGLLKIL QALACCQPTI LEEAPSILTM AMGGQ

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