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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125982498, gi...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HARRLLATTT ASARGSGQEE KENRKWSSPG SKAEMFLYSA FWAGGLGLGY FWLTQRYSST  60
   61 PDEEVKPDDE AVARLWHVTP RKDLPTYKAE QVEQHNAPDK GIWITYGLGV YDVTEFAENH 120
  121 PGGDKIMMAA GSAIDPFWAI YQQHNTLEVL ELLESFRIGN LEGLTVPNAE DELGSPWAKE 180
  181 PERHALLKPA SKRPFNAEPP IGLLAEKFYT PNEMFYVRNH LPVPVLVPEE YELEIDTSGG 240
  241 EQGGPLLTLT LAQIKALPRH TVTAAIMCGG NRRSEMTHIK AVKGLSWGAG AVGNAKWSGA 300
  301 RLCDVLREQG VQPNESMHVI FEGADLDPTS HPYGASIPLS KALDPRGDVL LAYEMNDEPL 360
  361 TRDHGYPIRV IVPGVVGARN VKWLTRIMVA DHESDSHWQQ NDYKGFSPST DWDTVDFSKA 420
  421 EAIQAMPVTS AICTPLPGER VKVDPQGGYI TVRGYAWSGG GRKILRVDLT GDEGKTWHVA 480
  481 ELEQEDSPDG RHYGWSLWTA RLPITEEQQQ RRKAGGSGEL EIWAKAVDSA YNVQPEKFEH 540
  541 IWNLRGVLAN AYHKVKVKL

YRC Informatics Platform - Version 3.0
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