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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125981445, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTFSPTYVY ECTIRCMLGP TGPKVNHSRD ERSERRSRYD GGNNQQLELL PVYIADTGPS  60
   61 LFGLSAHQDP RLAALCQQLS KHRTVLGPHS NQGDASTAAS RGHSKRQRKR VRARMRLPYR 120
  121 NKKVTLWVLF GIIVITMFLF KFTELRPTCL FRVDATNNEL SSQMVRVEKY VTDDNQRVYS 180
  181 YNREMPLIFI GGVPRSGTTL MRAMLDAHPD VRCGQETRVI PRILQLRSHW LKSEKESLRL 240
  241 QEAGITKEVM NSAIAQFCLE IIAKHGEPAP RLCNKDPLTL KMGSYVIELF PNAKFLFMVR 300
  301 DGRATVHSII SRKVTITGFD LSSYRQCMQK WNHAIEVMHE QCRDIGKDRC MMVYYEQLVL 360
  361 HPEEWMRKIL QFLDVPWNDA VLHHEEFINK PNGVPLSKVE RSSDQVIKPV NLEALSKWVG 420
  421 QIPGDVVRDM ADIAPMLSVL GYDPYANPPD YGKPDAWVQD NTSKQWWSST HGNGNGNGNG 480
  481 YGGNEYDDYD YDESKVQSMV GGWRKTTWSS FEDATILGFI RIFV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle