YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|54643034\|gb\|E...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRQSYIWAL AACLIACASA NGYGAQQGYG GPGAGGGPGG NDGGADASAG ASAGGAASSG  60
   61 GEYTISNGGS GAGEGADASG VAQAGQSGYA SSGQSSYGSD QNIPYKPVNT KGNTLTSSIT 120
  121 YPQNKGEILI HRPAPIIVKR PPTKVLVNHP PLVVKPAPVV LHKPPAIVLR KVYVKHHPRR 180
  181 VKVEPVFVNV VKPPAEKYFV NENKQGYGQG SHGGSQGSHH GHGHGGHGAH GHGAGSHGSG 240
  241 HGGSHQHGPG QALPAYASGA DSAAASAGYQ LLQGGNQGLS ALASIAGDRE GHYGGGHDHG 300
  301 HGHSHQHYGG AGPAGPGAYS APSY

Type	Start	End	Confidence
Signal Peptide	1	22	0.97
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	324	0.99