YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125981329, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQPTLAKLLL TLCGLCLLAT AGQGFIVSVD AHNEECFFEN VEGGTKFGVT FEVIDGGFLD  60
   61 VDIKISGPEN HVMHESEKES SGKYTFVAPA KGTYTVCFNN ERSSMTPKLV MFSIDVGDAP 120
  121 QRAPGAPGEE EVGHTKLEDM IRELSGTLTS VKHEQEYMHV RDKIHRSVNE STNSRVVLWS 180
  181 TFEALVLILM TVGQVYYLKR FFEQKGGMRF PVKRINLLKS LLQVLSISRV MANTRGATCQ 240
  241 TWPEEQPAMP RTVTGIGLLN QCRQVEEPRV QVNLDKLMAL SDKFPVEFPT DTCRVKAQPA 300
  301 GRFANIQQQV ASAYPVIHER TLLLYISFLE HKLEFGNSRE KSVYKGMSLV DFVQRLLSKR 360
  361 CVWFFGGGDY YRLLDGSVGF EGFESVGSAT EVPPLLLADV LSYDEIKLSA LLYVSTHSEF 420
  421 INNGRRSNAG EVTQDKSTIE REGVIVGLIG ARFERPNVME YQDIIISPTQ NIEANGYGFD 480
  481 SSENATRASD YRRLWRGFYE EPRDFKYTEA AVDGQRFSCA GPGDLIFDNL IMKKRYAISF 540
  541 DTLLLEAQAR GVAAGKPAYI HVVGIGLGVW KVTEKQEELF FEAFEERLLA LGKRLTHIGV 600
  601 VHFSWFHLER VRSLHDGATM PQTGIRIRIS ARNPADKLDE DMLPVVTYAW DGNALPGNEF 660
  661 WAGNLVGTGD PAAACSTLIS ELQNPHINAD YMSGHNLHIA SVEHGLLHIG EYARRVTTTA 720
  721 DG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle