YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|125981077, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIWRSLTVG SFLLLGLVCF YGHVESCNEV VCASIVSKCM LTQSCKCELK NCSCCKECLK  60
   61 CLGKKYYEEC CSCVELCPKP NDTRNSLSKK SHVEDFDGVP ELFNVLITNP DDSDTFGYNW 120
  121 NVFTFQVDFD KYLKGPKLEK DGHYYLRTND KNLDEAIQER DNIVTVNCTV IYLDQCVSWN 180
  181 KCRKSCQSTG ASSTRWFHDG CCECVGSTCI NYGVNESRCR NCPESKDLGD DFDENIEEEM 240
  241 QDFGDNMGPF DGSVNNNY

Type	Start	End	Confidence
Signal Peptide	1	26	0.95
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	258	0.99