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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54642716, gi|...
Protein type: Transmembrane
Type Confidence: 0.53
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTCPMDEAPE PKPKPVDNKP LPPAAGSVLI GTVAQKTEDP IVMRTCIAYE PGKVAPRYLG  60
   61 TIKSPLELPS KQQANEIEME MEMFVWSCSR GKHQLEMEMK QFYPVSPQMA TGNKPKKSIL 120
  121 PPAYSYSYSF HWLDMKLYAL LSLLVGSLAI GQISAAAGSH HLLCYYDGSS FVREGLSKLT 180
  181 LNDLDPALQY CTHLIYGYAG INPSSNKLVS TNEKLDLDLG SSLFRQVTSL KRKYPALKVL 240
  241 LSVGGDKDIV DPENNKYLTL LESSNARIPF INSAHSLVKT YGFDGLDLAW QFPKNKPKKV 300
  301 HGSIGKFWKG FKKIFSGDHI VDEKSEEHKE EFTALVRELK NAFRPDGYLL GLSVLPNVNS 360
  361 SLFFDVPAVI NNLDYVNLHA YDFQTPERNK EVADFPAPIY EANERNPELN VNYQVKYWVN 420
  421 NRAPASKINV AIAAYGRAWK LTKDSGLTGL PPVAETDGVA PAGLQTQVDG LLSWPEVCAK 480
  481 LPNPANQHLK GADGPLRKVG DPTKRFGSYA YRSADDAGEN GVWVGYEDPD TAGIKAEYVK 540
  541 REGLGGVALV DLSYDDFRGG CTGHDKFPIL RTIKSKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle