YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|54642694, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRSSLITRC LTVALILTVT LTLGSSSELE AGMVRKAARP RLNPTVPPAP RWGANMQMLR  60
   61 RHNSAAFNFW TEESDTNIWE HCGLFEGDIM LHRELLRNGL LNERLTWPEA AIPFYIDPQD 120
  121 FTANETMVIL KGFKEYHERT CIRFRPYEQG DKHWLMIKGN YSGCWSSVGR RQGGQVLNLN 180
  181 TPKCVTHGVV VHELLHALGF YHQQSATERD EYVKINWENI LDGHAHNFNK YARTHITNFG 240
  241 VEYDYQSVMH YSSRAFSKNG KATIEPLDPY ASLGQRRGLS DKDISKLNEM YEQDCNEGYL 300
  301 LNFDRFGSYI DELLDYFQ

Type	Start	End	Confidence
Signal Peptide	1	27	0.98
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	318	0.99