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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54641913, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVQQLSPWKV LTRRKRIQAD GSEGETKLNR VLGLWDLTAL GVGSTLGAGV YVLAGQIAKD  60
   61 QAGPSVMISF AIAALASLLA GICYAEFGAR VPKAGSAYVY SYVCIGEFAA FVIGWNLILE 120
  121 YVIGTASVCR GISLYLDSLL NDTLKETFAE VAPMNVTFLG SYFDFLAFGL VVVFGVALAF 180
  181 GVETSAMANN CITCLNIFIL GFVIIAGAIK ADFTNWTVDP STVSANATIG SGGFFPFGFE 240
  241 GTLQGAATCF FGFVGFDCIA TTGEEVRNPR KNIPQSILLS LLIIFLCYFG VSTVLTLMLP 300
  301 YYLQDANAPL PYAFEYVGWP VAMWIVTVGG LIGLLASLFG ALFPLPRVMY SMAQDGLLFR 360
  361 FLGKVSPRFH VPVTGSIVAA LFTAVIAGLF DLAQLVSLLS IGTLLAYSVV AISIMLLRYM 420
  421 EYYEAEENQT RIDKRNPDRL AYYTALKGPS TAADSADNAG NGLSKESVIT QDTHWKSSSC 480
  481 SSLDRIQNLS ELGEDLIEVK NANGKIFYVE DTKSENSTAT LGGTESPSRE DEQSVIAMLD 540
  541 DVLDAEDIQQ QQLELNQQNH IFERHFSLDS EMYPSVIETV IVATVHSSSE DDEVVSQQSL 600
  601 KLRKYTHDEC RVFAQQMLDE MFNSVVFFEQ LEAALVAREE AVPAEVNDSR DTIRDTPKLR 660
  661 RLASETSLRS QASSIEDPMH SDKFKDRLSH IIMNASAHKV NTAMRRKGEP EPEAETEPEP 720
  721 EEPEPEPGPA GRPERTLLKQ SKSETDVRRL MLKAISELKI NHNEDGNVGG DSSDSHTAHR 780
  781 HPSTSTSTSI QYPNSSHGNG NTAGLIPRPP KFDPILYKTI NSISLRKQRP SLSQQHVVDA 840
  841 KNLVVAATVA SSTELEPEPG PGQGQGQEPQ LVPFKAKLEA ILQRGPSHRT QQHPDPVRRQ 900
  901 RPQSTHAEQE TEEA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle