YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|125977826, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQKLTILCC ALLGVTAASY IPHGGYEHGH AVGYSIQTHH EAPKKKWDDH QEHHQWAPAP  60
   61 QHSHHWEAAP QHSQHQWAVP QAHHQWAAAE PQEHQKWTSH HAEEPKHHPK YQFDYGVKDT 120
  121 KTGDIKQQWE TRDGDKVKGG YTMKEADGRT RVVEYTADAH NGFQATVKHL GHADHFEHKQ 180
  181 QDHGYAHGHG HATSYVDVKQ DTSSKWQDKS SKWW

Type	Start	End	Confidence
Signal Peptide	1	17	0.99
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	214	0.99