YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|54641548\|gb\|E...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLLEQYEQQ YAALIAEITA HIGRLQQQSS SSDRNELCSK IDGSLPEAQE LLEQMGLEVR  60
   61 ELNPAQRTSF NSKLQVAQAE LRRLQAEYKQ TKNKVQPNAF TTLDLGGAGD FYEDVSINND 120
  121 QRQRLLDNSE RIERTGNRLT EGYRVAVETE ALGAQVLNDL HHQRETLQGA RARLRETNAD 180
  181 LGRASRTLNT MVLRALREKV VLYGVGVCFV VAVGVSLYLT FAPSSSAATS

Type	Start	End	Confidence
Cytoplasmic	1	199	0.96
Transmembrane Helix	200	222	0.94
Non-Cytoplasmic	223	230	0.93