YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|54641508, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDLEHIALQ MDRVPQSDDK TLARNQESIN NRSQNDAIDG RGGNRIPRAV PETDDDDDDR  60
   61 PFVQDGNGNP GVDDGLLGNG GGVTVLVPNG GNKGGRRPSY MFPGYSGPEF VNINGVETPI 120
  121 PDVNAYQHKK TLAQGMMDLA LLSANANQLR YVLEMNQQHP YFYPSLLFIS LSIIFQIAVG 180
  181 VGLIWNGRYN IKNEQEICRA NKINNYTVIG IFIVTVVNVL ISAFGIVERA PGPA

Type	Start	End	Confidence
Non-Cytoplasmic	1	164	0.79
Transmembrane Helix	165	185	0.95
Cytoplasmic	186	205	0.81
Transmembrane Helix	206	227	0.94
Non-Cytoplasmic	228	234	0.87