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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125977174, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNGRIPSVF SKTYVTPRRP YEKARLDQEL KIIGEYGLRN KREVWRVKYA LAKIRKAARE  60
   61 LLTLDEKDEK RLFQGNALLR RLVRIGVLDE SRMKLDYVLG LKIEDFLERR LQTQVFKLGL 120
  121 AKSIHHARVL IRQRHIRVRK QVVNIPSFVV RLDSQKHIDF SLKSPFGGGR PGRVKRKNLK 180
  181 KNLGETEIGR DCPYKMPKTG EKVKVSVKDR VQEDHCDLSL SELSEIPVKE IASFKRVTVL 240
  241 DVSSNRLTNL GRHFPILTQL VRLDLSKNQI RYLPEDFGLL VNLRHLDLYN NCLEHLPMSF 300
  301 SQLRRLRYLD LKTNPLIPAW VKIVGPCSTM KECQEAAKNC VSVCANLKPE IERDRLAQVS 360
  361 QEREQSADKM SAGGDGSTSS LANGAGAGAK KSTKPNNKKA KLKKLAEAAE KDLTFKPVNA 420
  421 VGAGNGAKSA SQKINQKKKS TNSTSWLNML QKVALSTLVT FMVLVVINIL LIYMLMFKNP 480
  481 EISEKLVEYI PHQYRDWIVT KTDLFRLRVT DWISEFRTPP EEH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle