YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|54641166, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.80
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSDPEIEFI EKDSGMSSLG GSKDETPERR TVATASAEQP ARDEENYDDE PDETLSERFI  60
   61 GLTEMLPGPV RTAACTVADT SVKTCKGLFS FSRNAAWIFF TTSIIMFAPI VFETERATME 120
  121 ELHKSQQKQV LLGPSSAMAS TPSGPTPHLP LVR

Type	Start	End	Confidence
Cytoplasmic	1	93	0.64
Transmembrane Helix	94	112	0.74
Non-Cytoplasmic	113	153	0.81