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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28949941
Protein type: Globular with Signal Peptide
Type Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHLGPLHLRF AASFIALSLL VVFNITLFSL DCALAAELED APPILLLDDV DSDLDVSQGS  60
   61 VSDLGSPLDQ MYEPEFAAFD RSIIGRDQVR DTNALINNEA FQLNVRQGDT ERFVFKLSQL 120
  121 SERELEVVQL ELRDEEHTWE DIDEDEDEDE AEEDEKDENN DDLSGKGLDR DSVDLNLASA 180
  181 KQKLGKRQQG ARRLFLSANT CLQPQAFNAT KTTQPPPQLT LYVSTSTDNV EPGPGADSNS 240
  241 QVSMVFNEGA IMYNFTTTTD VYVGVHAPNV AEIFDKPYNI KIAISTDGYY YSYNVDDDAD 300
  301 LIWVDSDSQG ALLITHNLTD SNDEKEQQRI MNTPPYVMFA QDKSNPSING VRYSFCGLEQ 360
  361 NAQIATTKDG KYSNMVQTGM TKRGQGNFPK QQFFFSGLKP STSYLGILAK TNVTDTGSPN 420
  421 LVGGGGHVFK ATNFQTKSGK LLSRNPGSSQ VGTKAQQLIQ ADHGNCNIVL NLTFCDQVAY 480
  481 SVPSNPNFGN ASVLAKFYDD YAAEAWGYFK KALAQVACEA PVTQRYSLTR NCSDCEAAYK 540
  541 DWLCSVTIPR CEDFSNNASY LHPRAMSQPF PDGERLDNAT MSLYAENYGD GKVLGKAFLQ 600
  601 SRSSRIDEFI KPGPYKEVLP CDYLCYRLVQ SCPSSMGFGC PLPGQKGFNS SYYIKNETNG 660
  661 EVVCNYPGSA HIFSGSSKDA VSVGLTIVVL VLWRRWSFCE LGQC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle