YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|44890390
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ALEAGRFSQT DYCFIMSWTI PKKRKMDTFR IMFCLVLLKV CSGASLDRFE SGKPRTTEVN  60
   61 LLHTSEKTNI TGLQADNGTS VGDDDYEEDY EGDYELNLPR VAFSTKPKHP SAMPTTEKTK 120
  121 KRKRKGKGKG RGNKKNLCKE EYKDFCIHGV CHYQRDLRTH SCVCHGGYSG ERCHVFTLPV 180
  181 GKEEQRYSRT TALAVIAVVL SLMCLAVIAI LLALRYHKKD DADVESEEKV KLEATSVKQ

Type	Start	End	Confidence
Non-Cytoplasmic	1	191	0.67
Transmembrane Helix	192	214	0.92
Cytoplasmic	215	239	0.70