YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|62202585, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSGSPEYSP FFAVMGASAA MVFSALGAAY GTAKSGTGIA AMSVMRPELI MKSIIPVVMA  60
   61 GIIAIYGLVV AVLIANSISD KITLYKSFLH LGAGLSVGLS GLAAGFAIGI VGDAGVRGTA 120
  121 QQPRLFVGMI LILIFAEVLG LYGLIVALIL STK

Type	Start	End	Confidence
Cytoplasmic	1	10	0.50
Transmembrane Helix	11	33	0.91
Non-Cytoplasmic	34	52	0.53
Transmembrane Helix	53	75	0.92
Cytoplasmic	76	87	0.48
Transmembrane Helix	88	111	0.89
Non-Cytoplasmic	112	124	0.52
Transmembrane Helix	125	150	0.87
Cytoplasmic	151	153	0.48