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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|126002623, gi...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQDRAKKLRA TFSWNQSQSQ IHIQTQTQPL SCLALKKELD EPQKHQEAKG RDLASPNCKR  60
   61 CPQEQRVQLF TGYPLNIKLY MQTTTTRMLS DRSRNQATTT TTTINQPAMH RKSKSKSKSI 120
  121 ANKTFMPFQS KKSLEQQQSA AADTAVSEGV EIESDARTST EIGANRTLKQ HQHPNIKNKN 180
  181 RSSSSSLVRC KMLIPLPTLG ATSFVTFLTL ICIETVLLST MSSCAKTFYM HWNTSNSIFR 240
  241 IDNTDHIIDV NKGNLAFEFD QVHIICPVYE PGTFENETEK YIIYNVSKVE YETCRITNAD 300
  301 PRVIAICDKP QKLMFFTITF RPFTPQPGGL EFLPGNDYYF ISTSSKDDLY RRIGGRCSTN 360
  361 NMKVVFKVCC ATEEKNKTTQ TTTSVAVSGA DPGGGNSVNI AAHDDSHGHV HGHNTGPGNT 420
  421 IGISGVNGGL SGGSPSVGIA TNPNNGPMNG LGTSINTNID QFNRIPIQPN IMGNNVGSSG 480
  481 VGGGIILSPG HGHGSINMLP PGRGGVNIAY PGHHHIQTGI RINNVPTQHS YPSHKGNVNG 540
  541 NSNGNDDHHH YDKHPNEVVK NEELTYNSGS AITARNYFNV WIWLCSWLPL PSSLAVCMSA 600
  601 HWINSSLVSI FAILAMHQVI RIALPT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle