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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|126002448, gi...
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GKRCFYNCPC LCCRQGCCVI VVGCCCCCIN IHCCNKCSSR TSYSPPPLAR KKACGTGGLV  60
   61 VSVVVSTIIA LARWTTAIAT LISSCMLLEL CGGGSCTNNK PVPVPTAASA SVSSNSDAKL 120
  121 KSLYGHSLYD ITNDQQLKSK NLCKMFCNSR NRKRQRRRRR RRRRRRRRHS HNGSRHSLRA 180
  181 DTCASIDAFE AINATVPKAN RLRSTPTRNV RLSSLKAIIS SWPSGNSSPI RHCSKIKRNR 240
  241 ANLIWLLIGL VWFEVKLINC NAIGSSSSYG SNYVNHKGCT ICHEEGKANF YSDKDNPHTD 300
  301 YNNYNKYNNN NYFYKKTNRP HNNIAPSDRV RLESIKRQIL TKLGLTHKPN VSHPLPKQFI 360
  361 WETIYRADGG RMASNDAFDS SSSDFDQRSR LRELSPSEIH RFNERDGTVF ATSDPDPHQD 420
  421 RYRSPVAYTF NVSRSHIYEK FMRDRTAIRA RQKNHEDDVQ SITLKNWPDI RQIKINSRSG 480
  481 STHQPKNIHT TASKPQRNGH GSDSRNSNGI GDRKGNSNAF SKSTYLIDIN RSSDSRANIG 540
  541 INGGIKPNDH VYFNDYSVQV HDKSQYEPLH GSSTRNGQHP MNIDFFSGIE QDEKPKRNDD 600
  601 SVMSDQENFD REDFFGNTQE IITFAEEGTQ YRQYRILEFA PQKERVPSQK LYIRSAQIHI 660
  661 RIDKPPSYWD AKPDADFQVE HLANGKRKWQ SKGSRHRIKI WVFQLTGGIN ITEKGIDQAF 720
  721 LFRASFNVDT KHLGWQKFDL TETIRKWYSQ NSEENLRLLI DCTGCGRLYS LQLFRISMPS 780
  781 SNSKIDNSAH INPNPNRPFL VLHTESTRNR RVRRRAVDCG GALSGQCCKE SFYVSFKALG 840
  841 WDDWIIAPRG YFANYCRGDC TGPFRTPDTF QTFHAHFIEE YRKMGLLNGM RPCCAPVKFS 900
  901 SMSLIYYGDD GIIKRDLPKM VVDECGCP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle